Publication: The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review.
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Identifiers
Date
2022-04-11
Authors
Santisteban-Espejo, Antonio
Bernal-Florindo, Irene
Perez-Requena, Jose
Atienza-Cuevas, Lidia
Moran-Sanchez, Julia
Fernandez-Valle, Maria Del Carmen
Romero-Garcia, Raquel
Garcia-Rojo, Marcial
Advisors
Journal Title
Journal ISSN
Volume Title
Publisher
MDPI
Abstract
Classic Hodgkin lymphoma (cHL) constitutes a B cell-derived neoplasm defined by a scarce tumoral population, termed Hodgkin and Reed-Sternberg (HRS) cells, submerged into a histologically heterogeneous microenvironment. The paucity of HRS cells has historically hampered genetic studies, rendering the identification of the recurrent genetic lesions and molecular pathways deregulated in this lymphoma difficult. The advent of high-throughput sequencing methods such as next-generation sequencing (NGS) could sensibly optimize the identification of the mutational landscape of cHL. However, there is no current consensus either in the design of panels for targeted NGS or in its most relevant clinical applications. In this work, we systematically review the current state of NGS studies of cHL, stressing the need for standardization both in the candidate genes to be analyzed and the bioinformatic pipelines. As different institutions have developed and implemented their own customized NGS-based protocols, to compare and systematically review the major findings of this ongoing research area could be of added value for centers that routinely perform diagnostic, monitoring and genotyping strategies in cHL samples. The results of this systematic review should contribute to the interdepartmental harmonization and achievement of a consensus in the current clinical applications of NGS studies of cHL.
Description
MeSH Terms
Hodgkin disease
Genotype
Lymphoma
Lymphoma, B-Cell
High-throughput nucleotide sequencing
Computational biology
Genotype
Lymphoma
Lymphoma, B-Cell
High-throughput nucleotide sequencing
Computational biology
DeCS Terms
Biología computacional
Enfermedad de Hodgkin
Genotipo
Linfoma
Linfoma de células B
Secuenciación de nucleótidos de alto rendimiento
Enfermedad de Hodgkin
Genotipo
Linfoma
Linfoma de células B
Secuenciación de nucleótidos de alto rendimiento
CIE Terms
Keywords
Classic Hodgkin lymphoma, Liquid biopsy, Next-generation sequencing, Standardization, Consensus
Citation
Santisteban-Espejo A, Bernal-Florindo I, Perez-Requena J, Atienza-Cuevas L, Moran-Sanchez J, Fernandez-Valle MDC, et al. The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review. Diagnostics (Basel). 2022 Apr 12;12(4):963