Publication:
A Rejection Gene Expression Score in Indication and Surveillance Biopsies Is Associated with Graft Outcome.

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Date

2020-11-03

Authors

Chamoun, Betty
Caraben, Anna
Torres, Irina B
Sellares, Joana
Jimenez, Raquel
Toapanta, Nestor
Cidraque, Ignacio
Gabaldon, Alejandra
Perello, Manel
Gonzalo, Ricardo

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MDPI AG
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Abstract

Rejection-associated gene expression has been characterized in renal allograft biopsies for cause. The aim is to evaluate rejection gene expression in subclinical rejection and in biopsies with borderline changes or interstitial fibrosis and tubular atrophy (IFTA). We included 96 biopsies. Most differentially expressed genes between normal surveillance biopsies (n = 17) and clinical rejection (n = 12) were obtained. A rejection-associated gene (RAG) score was defined as its geometric mean. The following groups were considered: (a) subclinical rejection (REJ-S, n = 6); (b) borderline changes in biopsies for cause (BL-C, n = 13); (c) borderline changes in surveillance biopsies (BL-S, n = 12); (d) IFTA in biopsies for cause (IFTA-C, n = 20); and (e) IFTA in surveillance biopsies (IFTA-S, n = 16). The outcome variable was death-censored graft loss or glomerular filtration rate decline ≥ 30 % at 2 years. A RAG score containing 109 genes derived from normal and clinical rejection (area under the curve, AUC = 1) was employed to classify the study groups. A positive RAG score was observed in 83% REJ-S, 38% BL-C, 17% BL-S, 25% IFTA-C, and 5% IFTA-S. A positive RAG score was an independent predictor of graft outcome from histological diagnosis (hazard ratio: 3.5 and 95% confidence interval: 1.1-10.9; p = 0.031). A positive RAG score predicts graft outcome in surveillance and for cause biopsies with a less severe phenotype than clinical rejection.

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MeSH Terms

Adult
Aged
Asymptomatic Diseases
Biopsy
Female
Graft Rejection
Humans
Kidney
Kidney Diseases
Kidney Transplantation
Male
Microarray Analysis
Middle Aged
Monitoring, Physiologic
Predictive Value of Tests
Prognosis
Research Design
Risk Factors
Transcriptome
Transplantation, Homologous
Treatment Outcome

DeCS Terms

Biopsia
Vigilancia en desastres
Trasplantes
Genes
Expresión génica
Diagnóstico
Intervalos de confianza
Fenotipo

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Keywords

biopsies, borderline changes, interstitial fibrosis and tubular atrophy, microarrays, rejection, renal transplantation, transcriptomics

Citation

Chamoun B, Caraben A, Torres IB, Sellares J, Jiménez R, Toapanta N, et al. A Rejection Gene Expression Score in Indication and Surveillance Biopsies Is Associated with Graft Outcome. Int J Mol Sci. 2020 Nov 3;21(21):8237.