RT Journal Article T1 Robust diagnosis of Ewing sarcoma by immunohistochemical detection of super-enhancer-driven EWSR1-ETS targets. A1 Baldauf, Michaela C A1 Orth, Martin F A1 Dallmayer, Marlene A1 Marchetto, Aruna A1 Gerke, Julia S A1 Rubio, Rebeca Alba A1 Kiran, Merve M A1 Musa, Julian A1 Knott, Maximilian M L A1 Ohmura, Shunya A1 Li, Jing A1 Akpolat, Nusret A1 Akatli, Ayse N A1 Özen, Özlem A1 Dirksen, Uta A1 Hartmann, Wolfgang A1 de Alava, Enrique A1 Baumhoer, Daniel A1 Sannino, Giuseppina A1 Kirchner, Thomas A1 Grünewald, Thomas G P K1 BCL11B K1 Ewing sarcoma K1 Ewing-like sarcoma K1 GLG1 K1 immunohistochemistry AB Ewing sarcoma is an undifferentiated small-round-cell sarcoma. Although molecular detection of pathognomonic EWSR1-ETS fusions such as EWSR1-FLI1 enables definitive diagnosis, substantial confusion can arise if molecular diagnostics are unavailable. Diagnosis based on the conventional immunohistochemical marker CD99 is unreliable due to its abundant expression in morphological mimics. To identify novel diagnostic immunohistochemical markers for Ewing sarcoma, we performed comparative expression analyses in 768 tumors representing 21 entities including Ewing-like sarcomas, which confirmed that CIC-DUX4-, BCOR-CCNB3-, EWSR1-NFATc2-, and EWSR1-ETS-translocated sarcomas are distinct entities, and revealed that ATP1A1, BCL11B, and GLG1 constitute specific markers for Ewing sarcoma. Their high expression was validated by immunohistochemistry and proved to depend on EWSR1-FLI1-binding to highly active proximal super-enhancers. Automated cut-off-finding and combination-testing in a tissue-microarray comprising 174 samples demonstrated that detection of high BCL11B and/or GLG1 expression is sufficient to reach 96% specificity for Ewing sarcoma. While 88% of tested Ewing-like sarcomas displayed strong CD99-immunoreactivity, none displayed combined strong BCL11B- and GLG1-immunoreactivity. Collectively, we show that ATP1A1, BCL11B, and GLG1 are EWSR1-FLI1 targets, of which BCL11B and GLG1 offer a fast, simple, and cost-efficient way to diagnose Ewing sarcoma by immunohistochemistry. These markers may significantly reduce the number of misdiagnosed patients, and thus improve patient care. YR 2017 FD 2017-08-04 LK https://hdl.handle.net/10668/25138 UL https://hdl.handle.net/10668/25138 LA en DS RISalud RD Apr 12, 2025