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Title: COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms
Authors: Ostaszewski, Marek
Mazein, Alexander
Gillespie, Marc E.
Kuperstein, Inna
Niarakis, Anna
Hermjakob, Henning
Pico, Alexander R.
Willighagen, Egon L.
Evelo, Chris T.
Hasenauer, Jan
Schreiber, Falk
Dräger, Andreas
Demir, Emek
Wolkenhauer, Olaf
Furlong, Laura I.
Barillot, Emmanuel
Dopazo, Joaquin
Orta-Resendiz, Aurelio
Messina, Francesco
Valencia, Alfonso
Funahashi, Akira
Kitano, Hiroaki
Auffray, Charles
Balling, Rudi
Schneider, Reinhard
metadata.dc.contributor.authoraffiliation: [Ostaszewski,M; Mazein,A; Balling,R; Schneider,R] Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg. [Gillespie,ME] Ontario Institute for Cancer Research, Toronto, Canada. [Gillespie,ME] College of Pharmacy and Health Sciences, St. John's University, Queens, NY, USA. [Kuperstein,I; Barillot,E] Institut Curie, PSL Research University, Mines Paris Tech, Inserm, Paris, France. [Niarakis,A] Department of Biology, Univ. Évry, University of Paris-Saclay, Genopole, 91025, Évry, France. [Hermjakob,H] European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Hinxton, UK. [Pico,AR] Institute of Data Science and Biotechnology, Gladstone Institutes, San Francisco, United States. [Willighagen,EL; Evelo,CT] Department of Bioinformatics-BiGCaT, NUTRIM, Maastricht University, Maastricht, The Netherlands. [Evelo,CT] Maastricht Centre for Systems Biology, Maastricht University, Maastricht, The Netherlands. [Hasenauer,J] Helmholtz Zentrum München, Institute of Computational Biology, Neuherberg, Germany. [Hasenauer,J] Center for Mathematics, Technische Universität München, Garching, Germany. [Hasenauer,J] Faculty of Mathematics and Natural Sciences, University of Bonn, Bonn, Germany. [Schreiber,F] University of Konstanz, Department of Computer and Information Science, Konstanz, Germany. [Schreiber,F] Monash University, Faculty of Information Technology, Melbourne, Australia. [Dräger,A] Computational Systems Biology of Infection and Antimicrobial-Resistant Pathogens, Institute for Bioinformatics and Medical Informatics (IBMI), University of Tübingen, 72076, Tübingen, Germany. [Dräger,A] Department of Computer Science, University of Tübingen, 72076, Tübingen, Germany. [Dräger,A] German Center for Infection Research (DZIF), partner site, Tübingen, Germany. [Demir,E] Department of Molecular and Medical Genetics, School of Medicine, Oregon Health & Science University, Portland, USA. [Wolkenhauer,O] Department of Systems Biology & Bioinformatics, University of Rostock, Rostock, Germany. [Wolkenhauer,O] Stellenbosch Institute of Advanced Study (STIAS), Wallenberg Research Centre at Stellenbosch University, 7602, Stellenbosch, South Africa. [Furlong,LI] Research Programme on Biomedical Informatics, Hospital del Mar Medical Research Institute, Department of Experimental and Health Sciences, Pompeu Fabra University, Barcelona, Spain. [Dopazo,J] Clinical Bioinformatics Area, Fundación Progreso y Salud. Hosp. Virgen del Rocío, Sevilla, Spain. [Dopazo,J] Bioinformatics in Rare Diseases. Centro de Investigación Biomédica en Red de Enfermedades Raras, Fundación Progreso y Salud, Hosp. Virgen del Rocío, Sevilla, Spain. [Dopazo,J] INB-ELIXIR-es, FPS, Hospital Virgen del Rocío, Sevilla, 42013, Spain. [Dopazo,J] Institute of Biomedicine of Seville (IBIS), Hospital Virgen del Rocio, 41013, Sevilla, Spain. [Orta-Resendiz,A] HIV, Inflammation and Persistence Unit, Virology Department, Institut Pasteur, Paris, France. [Orta-Resendiz,A] Bio Sorbonne Paris Cité, Université de Paris, Paris, France. [Messina,F] Dipartimento di Epidemiologia Ricerca Pre-Clinica e Diagnostica Avanzata, National Institute for Infectious Diseases "Lazzaro Spallanzani" I.R.C.C.S., Rome, Italy. [Messina,F] COVID 19 INMI Network Medicine for IDs Study Group, National Institute for Infectious Diseases "Lazzaro Spallanzani" I.R.C.C.S., Rome, Italy. [Valencia,A] Barcelona Supercomputer Center (BSC), Barcelona, Spain. [Valencia,A] Institucio Catalana de Recerca I Estudis Avançats (ICREA), Barcelona, Spain. [Funahashi,A] Department of Biosciences and Informatics, Keio University, Yokohama, Kanagawa, Japan. [Kitano,H] The Systems Biology Institute, Shinagawa, Tokyo, Japan. [Kitano,H] Okinawa Institute of Science and Technology Graduate University, Kunigami, Okinawa, Japan. [Kitano,H] Sony Computer Science Laboratories, Inc., Tokyo, Japan. [Auffray,C] European Institute for Systems Biology and Medicine (EISBM), Vourles, France.
Keywords: Coronavirus;Neumonía viral;Infecciones por coronavirus;Biología computacional;Bases de datos factuales;Humanos;Cooperación internacional;Modelos biológicos;Interacciones huésped-patógeno;Pademia
metadata.dc.subject.mesh: Medical Subject Headings::Disciplines and Occupations::Natural Science Disciplines::Biological Science Disciplines::Biology::Computational Biology
Medical Subject Headings::Information Science::Information Science::Medical Informatics::Medical Informatics Applications::Information Systems::Databases as Topic::Databases, Factual
Medical Subject Headings::Organisms::Eukaryota::Animals::Chordata::Vertebrates::Mammals::Primates::Haplorhini::Catarrhini::Hominidae::Humans
Medical Subject Headings::Anthropology, Education, Sociology and Social Phenomena::Social Sciences::Internationality::International Cooperation
Medical Subject Headings::Analytical, Diagnostic and Therapeutic Techniques and Equipment::Investigative Techniques::Models, Theoretical::Models, Biological
Medical Subject Headings::Diseases::Virus Diseases::RNA Virus Infections::Nidovirales Infections::Coronaviridae Infections::Coronavirus Infections
Medical Subject Headings::Phenomena and Processes::Microbiological Phenomena::Microbiological Processes::Host-Pathogen Interactions
Medical Subject Headings::Health Care::Environment and Public Health::Public Health::Disease Outbreaks::Epidemics::Pandemics
Medical Subject Headings::Diseases::Respiratory Tract Diseases::Respiratory Tract Infections::Pneumonia::Pneumonia, Viral
Issue Date: 5-May-2020
Publisher: Springer Nature Limited
Citation: Ostaszewski M, Mazein A, Gillespie ME, Kuperstein I, Niarakis A, Hermjakob H, et al. COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms. Scientific Data [Internet]. 2020;7(1).
Abstract: Researchers around the world join forces to reconstruct the molecular processes of the virus-host interactions aiming to combat the cause of the ongoing pandemic.
metadata.dc.identifier.doi: 10.1038/s41597-020-0477-8
ISSN: 2052-4463 (Online)
Appears in Collections:01- Artículos - FPS. Fundación Pública Andaluza Progreso y Salud
01- Artículos - Hospital Virgen del Rocío
01- Artículos - IBIS. Instituto de Biomedicina de Sevilla

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