Publication: Exome-wide rare variant analysis in familial essential tremor.
dc.contributor.author | Diez-Fairen, Monica | |
dc.contributor.author | Houle, Gabrielle | |
dc.contributor.author | Ortega-Cubero, Sara | |
dc.contributor.author | Bandres-Ciga, Sara | |
dc.contributor.author | Alvarez, Ignacio | |
dc.contributor.author | Carcel, Maria | |
dc.contributor.author | Ibañez, Laura | |
dc.contributor.author | Fernandez, Maria Victoria | |
dc.contributor.author | Budde, John P | |
dc.contributor.author | Trotta, Jean-Remi | |
dc.contributor.author | Tonda, Raul | |
dc.contributor.author | Chong, Jessica X | |
dc.contributor.author | Bamshad, Michael J | |
dc.contributor.author | Nickerson, Deborah A | |
dc.contributor.author | Aguilar, Miquel | |
dc.contributor.author | Tartari, Juan P | |
dc.contributor.author | Gironell, Alexandre | |
dc.contributor.author | Garcia-Martin, Elena | |
dc.contributor.author | Agundez, Jose Ag | |
dc.contributor.author | Alonso-Navarro, Hortensia | |
dc.contributor.author | Jimenez-Jimenez, Felix Javier | |
dc.contributor.author | Fernandez, Manel | |
dc.contributor.author | Valldeoriola, Francesc | |
dc.contributor.author | Marti, Maria Jose | |
dc.contributor.author | Tolosa, Eduard | |
dc.contributor.author | Coria, Francisco | |
dc.contributor.author | Pastor, Maria A | |
dc.contributor.author | Vilariño-Güell, Carles | |
dc.contributor.author | Rajput, Alex | |
dc.contributor.author | Dion, Patrick A | |
dc.contributor.author | Cruchaga, Carlos | |
dc.contributor.author | Rouleau, Guy A | |
dc.contributor.author | Pastor, Pau | |
dc.contributor.funder | Spanish Ministry of Science and Innovation | |
dc.contributor.funder | María de Maeztu programme | |
dc.contributor.funder | University of Washington Center for Mendelian Genomics | |
dc.contributor.group | University of Washington Center for Mendelian Genomics (UWCMG) | |
dc.date.accessioned | 2023-02-09T10:38:03Z | |
dc.date.available | 2023-02-09T10:38:03Z | |
dc.date.issued | 2020-11-21 | |
dc.description.abstract | Essential tremor (ET) is one of the most common movement disorders. Despite its high prevalence and heritability, its genetic etiology remains elusive with only a few susceptibility genes identified and poorly replicated. Our aim was to find novel candidate genes involved in ET predisposition through whole exome sequencing. We studied eight multigenerational families (N = 40 individuals) with an autosomal-dominant inheritance using a comprehensive strategy combining whole exome sequencing followed by case-control association testing of prioritized variants in a separate cohort comprising 521 ET cases and 596 controls. We further performed gene-based burden analyses in an additional dataset comprising 789 ET patients and 770 healthy individuals to investigate whether there was an enrichment of rare deleterious variants within our candidate genes. Fifteen variants co-segregated with disease status in at least one of the families, among which rs749875462 in CCDC183, rs535864157 in MMP10 and rs114285050 in GPR151 showed a nominal association with ET. However, we found no significant enrichment of rare variants within these genes in cases compared with controls. Interestingly, MMP10 protein is involved in the inflammatory response to neuronal damage and has been previously associated with other neurological disorders. We prioritized a set of promising genes, especially MMP10, for further genetic and functional studies in ET. Our study suggests that rare deleterious coding variants that markedly increase susceptibility to ET are likely to be found in many genes. Future studies are needed to replicate and further infer biological mechanisms and potential disease causality for our identified genes. | |
dc.description.sponsorship | The authors thank the subjects and their families whose help and participation made this work possible. This study was funded by the Spanish Ministry of Science and Innovation to P.P. [SAF2013-47939-R (2013–2018)], and M.F. was funded by the María de Maeztu programme (grant MDM-2017-0729). Sequencing was provided by the University of Washington Center for Mendelian Genomics (UW-CMG) and funded by NHGRI and NHLBI grants UM1 HG006493 and U24 HG008956. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health. The authors also acknowledge the technical and human support provided by the Sequencing and Genotyping Unit of the Genomics Facility (SGIker) of UPV/EHU, as well as European funding (ERDF and ESF). | |
dc.description.version | Si | |
dc.identifier.citation | Diez-Fairen M, Houle G, Ortega-Cubero S, Bandres-Ciga S, Alvarez I, Carcel M, et al. Exome-wide rare variant analysis in familial essential tremor. Parkinsonism Relat Disord. 2021 Jan;82:109-116. | |
dc.identifier.doi | 10.1016/j.parkreldis.2020.11.021 | |
dc.identifier.essn | 1873-5126 | |
dc.identifier.pmc | PMC7856267 | |
dc.identifier.pmid | 33279834 | |
dc.identifier.pubmedURL | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7856267/pdf | |
dc.identifier.uri | http://hdl.handle.net/10668/16738 | |
dc.journal.title | Parkinsonism & related disorders | |
dc.journal.titleabbreviation | Parkinsonism Relat Disord | |
dc.language.iso | en | |
dc.organization | Instituto de Investigación Biosanitaria de Granada (ibs.GRANADA) | |
dc.page.number | 109-116 | |
dc.provenance | Realizada la curación de contenido 02/08/2024 | |
dc.publisher | Elsevier Ltd | |
dc.pubmedtype | Journal Article | |
dc.relation.projectID | SAF2013-47939-R (2013–2018) | |
dc.relation.projectID | MDM-2017-0729 | |
dc.relation.projectID | U24 HG008956 | |
dc.relation.projectID | UM1 HG006493 | |
dc.relation.publisherversion | https://linkinghub.elsevier.com/retrieve/pii/S1353-8020(20)30873-7 | |
dc.rights.accessRights | Restricted Access | |
dc.subject | Essential tremor | |
dc.subject | Genetic risk | |
dc.subject | MMP10 | |
dc.subject | Rare variants | |
dc.subject | WES | |
dc.subject.decs | Masculino | |
dc.subject.decs | Adulto | |
dc.subject.decs | Anciano | |
dc.subject.decs | Anciano de 80 o más Años | |
dc.subject.decs | Edad de Inicio | |
dc.subject.decs | Femenino | |
dc.subject.decs | Humanos | |
dc.subject.decs | Linaje | |
dc.subject.decs | Metaloproteinasa 10 de la matriz | |
dc.subject.decs | Persona de mediana edad | |
dc.subject.decs | Predisposición genética a la enfermedad | |
dc.subject.decs | Secuenciación del exoma | |
dc.subject.decs | Temblor esencial | |
dc.subject.mesh | Adult | |
dc.subject.mesh | Age of Onset | |
dc.subject.mesh | Aged | |
dc.subject.mesh | Aged, 80 and over | |
dc.subject.mesh | Essential Tremor | |
dc.subject.mesh | Female | |
dc.subject.mesh | Genetic Predisposition to Disease | |
dc.subject.mesh | Humans | |
dc.subject.mesh | Male | |
dc.subject.mesh | Matrix Metalloproteinase 10 | |
dc.subject.mesh | Middle Aged | |
dc.subject.mesh | Pedigree | |
dc.subject.mesh | Exome Sequencing | |
dc.subject.mesh | Young Adult | |
dc.title | Exome-wide rare variant analysis in familial essential tremor. | |
dc.type | research article | |
dc.type.hasVersion | VoR | |
dc.volume.number | 82 | |
dspace.entity.type | Publication |
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