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Exome-wide rare variant analysis in familial essential tremor.

dc.contributor.authorDiez-Fairen, Monica
dc.contributor.authorHoule, Gabrielle
dc.contributor.authorOrtega-Cubero, Sara
dc.contributor.authorBandres-Ciga, Sara
dc.contributor.authorAlvarez, Ignacio
dc.contributor.authorCarcel, Maria
dc.contributor.authorIbañez, Laura
dc.contributor.authorFernandez, Maria Victoria
dc.contributor.authorBudde, John P
dc.contributor.authorTrotta, Jean-Remi
dc.contributor.authorTonda, Raul
dc.contributor.authorChong, Jessica X
dc.contributor.authorBamshad, Michael J
dc.contributor.authorNickerson, Deborah A
dc.contributor.authorAguilar, Miquel
dc.contributor.authorTartari, Juan P
dc.contributor.authorGironell, Alexandre
dc.contributor.authorGarcia-Martin, Elena
dc.contributor.authorAgundez, Jose Ag
dc.contributor.authorAlonso-Navarro, Hortensia
dc.contributor.authorJimenez-Jimenez, Felix Javier
dc.contributor.authorFernandez, Manel
dc.contributor.authorValldeoriola, Francesc
dc.contributor.authorMarti, Maria Jose
dc.contributor.authorTolosa, Eduard
dc.contributor.authorCoria, Francisco
dc.contributor.authorPastor, Maria A
dc.contributor.authorVilariño-Güell, Carles
dc.contributor.authorRajput, Alex
dc.contributor.authorDion, Patrick A
dc.contributor.authorCruchaga, Carlos
dc.contributor.authorRouleau, Guy A
dc.contributor.authorPastor, Pau
dc.contributor.funderSpanish Ministry of Science and Innovation
dc.contributor.funderMaría de Maeztu programme
dc.contributor.funderUniversity of Washington Center for Mendelian Genomics
dc.contributor.groupUniversity of Washington Center for Mendelian Genomics (UWCMG)
dc.date.accessioned2023-02-09T10:38:03Z
dc.date.available2023-02-09T10:38:03Z
dc.date.issued2020-11-21
dc.description.abstractEssential tremor (ET) is one of the most common movement disorders. Despite its high prevalence and heritability, its genetic etiology remains elusive with only a few susceptibility genes identified and poorly replicated. Our aim was to find novel candidate genes involved in ET predisposition through whole exome sequencing. We studied eight multigenerational families (N = 40 individuals) with an autosomal-dominant inheritance using a comprehensive strategy combining whole exome sequencing followed by case-control association testing of prioritized variants in a separate cohort comprising 521 ET cases and 596 controls. We further performed gene-based burden analyses in an additional dataset comprising 789 ET patients and 770 healthy individuals to investigate whether there was an enrichment of rare deleterious variants within our candidate genes. Fifteen variants co-segregated with disease status in at least one of the families, among which rs749875462 in CCDC183, rs535864157 in MMP10 and rs114285050 in GPR151 showed a nominal association with ET. However, we found no significant enrichment of rare variants within these genes in cases compared with controls. Interestingly, MMP10 protein is involved in the inflammatory response to neuronal damage and has been previously associated with other neurological disorders. We prioritized a set of promising genes, especially MMP10, for further genetic and functional studies in ET. Our study suggests that rare deleterious coding variants that markedly increase susceptibility to ET are likely to be found in many genes. Future studies are needed to replicate and further infer biological mechanisms and potential disease causality for our identified genes.
dc.description.sponsorshipThe authors thank the subjects and their families whose help and participation made this work possible. This study was funded by the Spanish Ministry of Science and Innovation to P.P. [SAF2013-47939-R (2013–2018)], and M.F. was funded by the María de Maeztu programme (grant MDM-2017-0729). Sequencing was provided by the University of Washington Center for Mendelian Genomics (UW-CMG) and funded by NHGRI and NHLBI grants UM1 HG006493 and U24 HG008956. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health. The authors also acknowledge the technical and human support provided by the Sequencing and Genotyping Unit of the Genomics Facility (SGIker) of UPV/EHU, as well as European funding (ERDF and ESF).
dc.description.versionSi
dc.identifier.citationDiez-Fairen M, Houle G, Ortega-Cubero S, Bandres-Ciga S, Alvarez I, Carcel M, et al. Exome-wide rare variant analysis in familial essential tremor. Parkinsonism Relat Disord. 2021 Jan;82:109-116.
dc.identifier.doi10.1016/j.parkreldis.2020.11.021
dc.identifier.essn1873-5126
dc.identifier.pmcPMC7856267
dc.identifier.pmid33279834
dc.identifier.pubmedURLhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7856267/pdf
dc.identifier.urihttp://hdl.handle.net/10668/16738
dc.journal.titleParkinsonism & related disorders
dc.journal.titleabbreviationParkinsonism Relat Disord
dc.language.isoen
dc.organizationInstituto de Investigación Biosanitaria de Granada (ibs.GRANADA)
dc.page.number109-116
dc.provenanceRealizada la curación de contenido 02/08/2024
dc.publisherElsevier Ltd
dc.pubmedtypeJournal Article
dc.relation.projectIDSAF2013-47939-R (2013–2018)
dc.relation.projectIDMDM-2017-0729
dc.relation.projectIDU24 HG008956
dc.relation.projectIDUM1 HG006493
dc.relation.publisherversionhttps://linkinghub.elsevier.com/retrieve/pii/S1353-8020(20)30873-7
dc.rights.accessRightsRestricted Access
dc.subjectEssential tremor
dc.subjectGenetic risk
dc.subjectMMP10
dc.subjectRare variants
dc.subjectWES
dc.subject.decsMasculino
dc.subject.decsAdulto
dc.subject.decsAnciano
dc.subject.decsAnciano de 80 o más Años
dc.subject.decsEdad de Inicio
dc.subject.decsFemenino
dc.subject.decsHumanos
dc.subject.decsLinaje
dc.subject.decsMetaloproteinasa 10 de la matriz
dc.subject.decsPersona de mediana edad
dc.subject.decsPredisposición genética a la enfermedad
dc.subject.decsSecuenciación del exoma
dc.subject.decsTemblor esencial
dc.subject.meshAdult
dc.subject.meshAge of Onset
dc.subject.meshAged
dc.subject.meshAged, 80 and over
dc.subject.meshEssential Tremor
dc.subject.meshFemale
dc.subject.meshGenetic Predisposition to Disease
dc.subject.meshHumans
dc.subject.meshMale
dc.subject.meshMatrix Metalloproteinase 10
dc.subject.meshMiddle Aged
dc.subject.meshPedigree
dc.subject.meshExome Sequencing
dc.subject.meshYoung Adult
dc.titleExome-wide rare variant analysis in familial essential tremor.
dc.typeresearch article
dc.type.hasVersionVoR
dc.volume.number82
dspace.entity.typePublication

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